Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MANLSQPSEFVLLGFSSFGELQALLYGPFLMLYLLAFMGNTIIIVMVIADTHLHTPMYFFL-GNFSLLEILVTMTAVPRMLSDLLV----PHKVITFTGCMVQFYFHFSLGSTSFLILTDMALDRFVAICHPLRYGTLMSRAMCVQLAGAAWAAPFLAMVPTVLSRAHLDYCHGDVINHFFCDNEPLLQLSCSDTRLLEFWDFLMALTFVLSSFLVTLISYGYIVTTVLRIPSASSCQKAFSTCGSHLTLVFIGYSSTIFLYVRPGKAHSVQVRKVVALVT------------SVLTPFLNPFILTFCNQTVKTVLQGQMQRLKGLCKAQ- |
| 4XGC Chain:B ((62-352)) | EGSINAIMEEYRSYFPKW--MCILNEGFNILLYGL---GSKHQLLQSFHREVLHKQTVLVVNGFFPSLTIKDMLDSITSDILDAGISPANPHEAVD----MIEEEFALIPETHLFLIVHN--LD-----------GAMLRNVKAQAILSRLARIPNIHLLASI---DHIN-------TPLLWDQGKLCSFN------FSWWDCTTMLPYTNETAFENSL-------LVLALSSMRSVFSSLTTNSRGIYMLIVKYQLK-----NKGNATGMPFRDLYSSCREAFLVSSDLALRAQLTEFLDHKLVKSKRSSEQLTIPIDGALLQQFLEEQE |
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General information:
TITO was launched using:
| RESULT:
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Template: 4XGC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -243325 for 1899 contacts (-128.1/contact) +
2D Compatibility (PS) -26994 + (NN) 2066 + (LL) 4032
1D Compatibility (HY) -15600 + (ID) 2350
Total energy: -282171.0 ( -148.59 by residue)
QMean score : 0.137
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