Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MVKAGN--ETQISEFLL-----LGFSEKQELQPF-----LFGLF-----LSMYLVTVLGNLLIILAAISDSCLHTPMYFFL----------SNLSFVDICFASTMVPKMLVNI---QTQSKVITYAGCITQMCFFVLFIVLDSLLLTVMAYDQFVAICHPLHYTVIMSPQLCGLLVLVSWIMSV-LNSMLQSLVTLQLSFCTDLEIPH--FFCELN-----EMIHLACSDTFVNNMVMHFAAVLLDGGPLVGILYSYCRIVSSIRAISS---------------------TQGKYKALSTCASHLSVVSIFYGTGLGVYLSSTMTQNLHSTAVASVMYTVVTPMLNPFIYSLRNKDIKGALTQFFRGKQ |
| 4L9B Chain:A ((2-393)) | VLKGINFPENEASILDLAMQNRSGVLDGMTIDILNTTSNQLALFHGTAVLQGYGIEITGAPDVLVDTTGQSNETMLLCLTIDLNQVNVPSGTAVDYKQIRLEFLDVPTLLKQYWRDHSLHDLIDPRRVISMPLYWITFGQTGTTPLYEQIKSNYIDNSGNPAYGIAARCENFNHFINKVAVQSIPINGVANRPVSSTASQLTNYKVWRNPYLCSQDPRDKFAPDNLVIEEDGIYRIDISGSINIANYTFPARVGGRYFQIVCARNSSANNLAEFGAEQHLPPSGVWTRRVLVGEYTAGMTEQAFSSVATISLFKGDNFFLQFETGTNTSRDSAYNNGYGTSGTHLRNFSYTLERVGDLNGTAYYDNGTF |
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General information:
TITO was launched using:
| RESULT:
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Template: 4L9B.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -272179 for 2260 contacts (-120.4/contact) +
2D Compatibility (PS) -32156 + (NN) 8485 + (LL) 0
1D Compatibility (HY) -2000 + (ID) 2350
Total energy: -300200.0 ( -132.83 by residue)
QMean score : 0.055
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