Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MVKITINSQECEVKPGLTIIQACETVGVEIPRFCYHERLAIAGNCRMCLVEVKGGPPKPVASCAMPVAEGMVIYTDTPKVKKAREGVLEFLLINHPLDCPICDQGGECDLQDITVVYGKGNSRFDEHKRAIPKKHFGQLIEAAMNRCIHCTRCIRFLSDVAGTNELGGIGRGENMEISTYIKKHISSELSGNIIDLCPVGALTSKPYSFTARPWELSHCETIDVLDAVGSSIRVDYRGPEVMRILPRLNEEVNEEWISDKTRFAYDG-LKVQRLDQPYIKRD-------NRLVPADWNEALTVAAKKLRS----TKPNKIAAIAGDLADCESMLLLKEIMQ-KLGSSNIDCRQDGAKLIP------NNRGSYVFNTTIEGIENVDLCLLINTNPKVEAPIINARIRKRYL--QGNFPIASIGPD-IEYLYHVEKL-----GNNPGVLNEIAKGN--H----------------------------------------------------------------------------KFCKLLSAAQ-NPMLIIGQDALTRDDSES-ILALAGAIAEK-FNMVRNDWNGFNVLHKAAARVGGLD-IGFVPKKD------------------------------GKNINQILEQAESGEIEVVYLLGAD-EIN----T--LKL----ENAFVIYQGHHGDRGAHMADIILPGAAYTEKYATYVNTEGRVQRAKLAVSPPGEAKEDWSIIKNLSQYLGLSLPYDSLFDVRKKLDAIGPQFRNTDQVVKNKWMSITCNEIKLSSVPFFLKECNFYMTDSISRASKIMANCTKAFYEHAS |
| 3ML1 Chain:A ((4-545)) | ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VTDSEVTKLKWSKAPCRFCGTGCGVTVAVKDNKVVATQGDPQAEVNKGLNCVKGYFLSKIMYGQDRLTRPLMRMKNGKYDKNGDFAPVTWDQAFDEMERQFKRVLKEKGPTAVGMFGSGQWTVWEGYAAAKLYKAGFRSNNIDPNARHCMASAAAGFMRTFGMDE-PMGCYDDFEAADAFVLWGSNMAEMHPILWTRVTDRRLSHPK-TRVVVLSTFTHRCFDLADIGIIFKPQTDLAMLNYIANYIIRNNKVNKDFVNKHTVFKEGVTDIGYGLRPDHPLQKAAKNASDPGAAKVITFDEFAKFVSKYDADYVSKLSAVPKAKLDQLAELYADPNIKVMSLWTMGFNQHTRGTWANNMV-YNLHLLTGKIA-TPGNSPFSLTGQPSACGTAREVGTFSHRLPADMVVTNPKHREEAERIWKLPPGTIPDKPGYDAVLQNRMLKDGKLNAYWVQVNNNMQAAANLMEEGLPGYRNPANFIVVSDAYPTVTALAADLVLPSAMWVEKEGAYGNAERRTQFWHQLVDAPGEARSDLWQLVEFAKRFKVEEVWPPELIAKKPEYKGKTLYDVLYRNGQVDKFPLKDVNAEYHNAEAKAFGFYLQKGLFEEYATFGRGHGHDLAPFDAY |
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General information:
TITO was launched using:
| RESULT:
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Template: 3ML1.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -131121 for 3382 contacts (-38.8/contact) +
2D Compatibility (PS) -41821 + (NN) -14997 + (LL) 13100
1D Compatibility (HY) -6400 + (ID) 3050
Total energy: -184289.0 ( -54.49 by residue)
QMean score : 0.390
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