Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MFIQIEETPNPNTLKFLPGF--AILNERETADFSNPDEIKNSKLAADLFQIEHVIRVFFGHDFISVTKSDGI-SWDILKVEILTTVMDHFTSGGK-ALDRKGVNDNNIPDEEFFDENDIEIVNRI---KELMENYIKPAVAQDGGDIKFRG----YKDG-IVYVELQGACSGCPSAA------ITLKQGVQNMLCYHIPEVSGIETTL-------- |
| 1R5I Chain:D ((3-216)) | SMKLRVENPKKAQKHFVQNLNNVVFTNKELEDIYNLSNKEETKEVLKLFKLK--VNQFYRHAFGIVNDYNGLLEYKEIFNMMFLKLSVVFDTQRKEANNVEQIKRNIAILDEIMAKADNDLSYFISQNKNFQELWDKAVKLTKEMKIKLKGQKLDLRDGEVAINKVRELFGSDKNVKELWWFRSLLVKGVYLIKRYYEGDIELKTTSDFAKAVFED |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1R5I.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -28913 for 1248 contacts (-23.2/contact) +
2D Compatibility (PS) -19200 + (NN) -2890 + (LL) 236
1D Compatibility (HY) -5600 + (ID) 1700
Total energy: -58067.0 ( -46.53 by residue)
QMean score : 0.166
|
|
|