Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIIEHARDMLKRERLFFDKMQAHIGEVNGTISIGCSSLIGQTLLPEVLSLYNAQFPNVEIQVQVGSTEQIKANHR--DYHVMITRGNK-VMNLANTHLFNDDHYFIFPKNRR---------DDVTKLPFIEFQADPIYINQIKQWYNDNLEQDYHATITVDQVATCKEMLISGVGVTILPEIMMKNISKEQFEFEKVEIDNEPLIRSTFMSYDPSMLQLPQVDSFVNLMASFVEQPKA
1I6A Chain:A ((89-295))
--------------------------MSGPLHIGLIPTVGPYLLPHIIPMLHQTFPKLEMYLHEAQTHQLLAQLDSGKLDAVILALVKESEAFIEVPLFDEPMLLAIYEDHPWANREAVPMADLAGEKLLMLEDGHCLRDQAMGFCFEAGADED-THFRATSLETLRNMVAAGSGITLLPALAVPPERKR-DGVVYLPAIKPEPRRTIGLVYRPGSPLRSRYEQLAEAIRARMDG---
General information:
TITO was launched using:
RESULT:
Template:
1I6A.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -109936 for 1479 contacts (-74.3/contact) +
2D Compatibility (PS) -20696 + (NN) -6316 + (LL) 2996
1D Compatibility (HY) -9600 + (ID) 1500
Total energy: -145052.0 ( -98.07 by residue)
QMean score : 0.445
(partial model without unconserved sides chains):
PDB file :
Tito_1I6A.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1I6A-query.scw
PDB file :
Tito_Scwrl_1I6A.pdb
: