Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MVSLYLENGLFLQAQSFGASGTQVGELVFNTSMSGYQEVISDPSYKGQFVVFSMPEIGVVGANPKDDESFFSCAGVLARHYNEFFSNSRADSSLSTYLKKRGVLGISGVDTRSLIKTLRHHGCLMMIASTIEHDRNKLEEVLKNAPKISHSPLVSSVSTPKIITHQRATFDFNTLDYKPFDEKIPHKIIAVLDFGA-----KGNILNELQNV----GLKALIYPHHTK-AN------------ELIKAYEKKEISGIFLSNGPGDPLSLQQEIGEIKRLINAKIPMFGICLGHQLLSIAQGYPTYKLKFG-----------------------------HHGSNHPVKNLE-------TNAVEIT--AQNHNYCVPEE---IE-E-IATITHRNLFDN-TIEGVRYKNAP-IISVQHHPESSPGPKESHYIFKEFVGLLEGF |
| 2V4U Chain:A ((297-549)) | ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------KICSIALVGKYTKLRDCYASVFKALEHSALAINHKLNLMYIDSIDLEKITETEDPVKFHEAWQ--KLCKADGILVPGGFGIRGTL-GKLQAISWARTKKIPFLGV-LGMQLAVIEFARNCLNLKDADSTEFRPNAPVPLVIDMPEHNPGNLGGTMRLGIRRTVFKTENSILRKLYGDVPFIEERHRHRFEVNPNLIKQFEQNDLSFVGQDV-DGDRMEIIELANHPYFVGVQFHPEFSSRPMKPSPPYLGLLLAATG- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2V4U.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -53154 for 1458 contacts (-36.5/contact) +
2D Compatibility (PS) -19795 + (NN) -9648 + (LL) 11568
1D Compatibility (HY) -7600 + (ID) 2000
Total energy: -80629.0 ( -55.30 by residue)
QMean score : 0.436
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