Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ------------------------------------------------------------------------------------------------------------------------------------------MAIKKSELYSSLWAGADSLRGGMDASEYKNYVLNLLFLKYISDKAKNNMDSEIEVPQGCFYEDILALEGDKEIGDKLNKIIAKIAERNDLKGVIDSVDFNDNTKLGEGKAMIDTLSNLVKIFADLSLGAHGALDDDLLGDAYEYLMRHFASESGKSKGQFYTPSEVSLLLSLLLG--IDENTRQDKSIYDPTCGSGSLLLKASSLAGKK-GLTIYGQEKDISTTALCKMNMILHNSATADIAKGGSSTLSNPLFTTENGMLKTFDYVVA-NPPFSLKNWTDGLSIDPKSKQVINDSFNRFEDGTPPEKNG----DFAFLLHIIKSLNPTGKGAVI-LPHGVLFRGNAEAQIRKNLLMKGYIKGVIGLAPN-LFYGTSIPACVIVLDKENAHARKGVFVIDASKDFKKDGNKNRLREQD--------------VQKMIDTFNALKEIPYYSKMVSLEEISLNDYNLNIPRYIAAKQELEKDLFALINSPSYLPKNEIKAYDPYFQVFKELKNTLFKKSDKEGYYALKTECENIKDLITQSLEYQTFHASVLSAFESLDLFTTFNDLEPGFNPKTLIESVCSKVLKEFEKVGILDKY-GVYQLFKDYYNEVLQDDWFLISFNGFRSAKELRKLTPLKDKNKKANYLEEPDFIVQKTYYKSDLIPKHLIKQRFFEKETKELEELENALNEK-EALLDEFIEEHSNEEGLFDGLKINESVLKKELKNATDLEDKQILKTALEW-LEAKNKALKMKNKAYEELELKAFHQYKNLEINEIKDLIIKDKWLNSLKNALENKIQKRTNAFASALNEIISSYSN-SLLELDKEVKESESKVLEHLKDLGLMG |
| 3S1S Chain:A ((6-875)) | LNNCVFSYLPSYGDDEVSVYHPICEAALNQALVNTGLDSTYEVVHHELVGSIEADFVIKNKQTKKYLLIVEVKRTKSQVSSTRYRLQAQSYVREANIKVEQHYYCLTNLEIIDFFKHDPNKPVVSQQIIEPSPIVVGNFSDTVSEFYNRLVEAFQNIIDISVNDAGTYKSSTANLVDILE-NRKDNSTSWHQALVVAGYEYIRGVLRGQNVEVPTRDAIYFKSRPGRLLEEGRKIDFNVLFS-----EPEPNTNDNDIWNVNLLSSLNDLGRRILTGDELAELIHDIATRGRGHEGVVPTDIELGKVLSIISQHILGRPLTEDEVISDPAAGSGNLLATVSAGFNNVMPRQIWANDIETLFLELLSIRLGLLFPQ--LVSSNNAPTITGEDVCSLNPEDFANVSVVVMNPPYVSG------VTDPAIKRKFAHKIIQLTGNRPQTLFGQIGVEALFLELVTELVQDGTVISAIMPKQYLTAQGNESKAFREFLVGNFGLEHIFLYPREGLFEEVIKDTVVFVGRKGSSV--EEIEVLDSFTPLEQVDLHNLKRALSNSSNEQIIQPMGMELRKEKREELENRVTVGWRHITSNGRVAEEWITNNLESHCIRLVASDYDLRRGRVGNK--GASDLLFINSKKKLWDLLDESVPRDW-------LYPALRKVNEINTPIFNEDATPVRFLCPPNSA------------YQDGTGESIILDKILDVYVDFQVYKSKQKKFEKSKEELKEILYKESDFYS-------SEHTVFIPRALRRSARAFINEQKVFC-----------------------STNALEVFGGNSEEMWLLLSWLSS--------------------------------VFAQLQFEAMAKDQEGERKLEKKSIQNLYIPNLGDIDDVLKQDLIEEVREIHFFDLCRP--------RVRKLDLLWAKVFWSGNEMS--KTKEAAELLEDLVFERYPEGSQ-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3S1S.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -35013 for 5732 contacts (-6.1/contact) +
2D Compatibility (PS) -73900 + (NN) -18623 + (LL) 6280
1D Compatibility (HY) -12400 + (ID) 5050
Total energy: -138706.0 ( -24.20 by residue)
QMean score : 0.261
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