Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSLKMKWIIAISIIIVLLVVGWFLGTRLTVKKYEVSSTKIEKEIKLVQLSDLHFSE-FGDKNEKLLHKVENLNPDVIAITGDLFDRQGDS-------V-PKELIKKLTKIAPVYFSPGNHEYDVKNAY--EDDYKPFLEKMGV-----VNLEDKTATIDVGGQKFQMSGLRSSANLDYDYSYYKKGLAEI-QTQQ-D---SQYYQVLLSHMPDYFKL-----------------YVENDFDLTLSGHTHGGIVRIPYTNIGAIAPGPQRTILPEYVYGEHSKNGKTMIISAGLGAGSLHQKAFPRLGNPYEIVAVTIKPELK |
| 1XZW Chain:A ((125-363)) | -----------------------------------------VPYVFGLIGDIGQTHDSNTTLTHYEQ--NSAKGQAVLFMGDLSYSNRWPNHDNNRWDTWGRFSERSVAYQPWIWTAGNHEIDYAPDIGEYQPFVPFTNRYPTPHEASGSGDPLWYAIKR--ASAHIIVLSSYSGFV----KYSPQYKWFTSELEKVNRSETPWLIVLVHAPLYNSYEAHYMEGEAMRAIFEPYFVYYKVDIVFSGHVHSYERSERVS--NVAY---N---IVNAKCTPVSDESAPVYITIGDGGN-------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1XZW.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -32182 for 1518 contacts (-21.2/contact) +
2D Compatibility (PS) -21399 + (NN) -8867 + (LL) 6560
1D Compatibility (HY) -6400 + (ID) 1500
Total energy: -63788.0 ( -42.02 by residue)
QMean score : 0.392
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