Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNKFFLESERLIIRPLEESDYDSWYTSFMNRGPSLTPFDDGILDMSMCDINWFKNLVNLQRKEWESDIVYIFGVFLKS-GEHVGMLNIVTLARADMQWGELGYVFHNQFWSNGYAFESILALLNSTYEKLGFHHIEAQITPGNERSENLVRRLGLTYETTRKDFSFENGKWTDKLIYSINLHNNNLE
2FSR Chain:A ((27-189))
--IPTLRTERLTLRPLAMADFPAYRD-F-MASPRSTGVGGPYD-LP-STWGVFCHDLANW----HFFGHGALMIDLGETGECIGQIGINHGP--LFPEKELGWLLYEGHEGRGYAAEAAVALRDWAFETLNLPTLVSYVSPQNRKSAAVAERIGGTLDPLAPRSD------PEDLVYRYHQ------
General information:
TITO was launched using:
RESULT:
Template:
2FSR.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -112029 for 1243 contacts (-90.1/contact) +
2D Compatibility (PS) -17697 + (NN) -8351 + (LL) 1396
1D Compatibility (HY) -5200 + (ID) 1800
Total energy: -143681.0 ( -115.59 by residue)
QMean score : 0.467
(partial model without unconserved sides chains):
PDB file :
Tito_2FSR.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2FSR-query.scw
PDB file :
Tito_Scwrl_2FSR.pdb
: