Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKIGDKLKGTVTGIRPYGAFVSLED---GRTGLIHISEIKT-GYIDNIYDVLSVGDEVYVQVIDVDEFTQKASLSLRTLEEERHHIQHRHRFSNNRLKIGFKPLEENLPSWVEEGLAYLNNK
2EQS Chain:A ((262-348))
PTIGDIYNGKVTSIMQFGCFVQLEGLRKRWEGLVHISELRREGRVANVADVVSKGQRVKVKVLSFTG--TKTSLSMKDVDQETGEDLNP---------------------------------
General information:
TITO was launched using:
RESULT:
Template:
2EQS.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -47541 for 571 contacts (-83.3/contact) +
2D Compatibility (PS) -8332 + (NN) 2045 + (LL) 1888
1D Compatibility (HY) -7200 + (ID) 1600
Total energy: -60740.0 ( -106.37 by residue)
QMean score : 0.475
(partial model without unconserved sides chains):
PDB file :
Tito_2EQS.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2EQS-query.scw
PDB file :
Tito_Scwrl_2EQS.pdb
: