Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MVTVILAEKETQAAAYAESLGPASKKGKVHIIKHTPYFSDEVHVIAAEGHLFEYGLPKDNWDLDKLPLVDVSFKQTLKQDKVSKEIFKQIYQEVTAADQVIIGTDSDREGERIAYSILSHIPEGKNKVTKRLWVNSLTTRALQKAFQNLREPIETYNYYLEAEARAQSDWLVGMNLSPLVTLELQKRGRLPKGKGNSLSVGRVQTPGVRLICENDLAIQNFRPETYWKLQLQDKETEISFSNKEKYSDSELILAQARQLKAISIVSSVEMEEKQRAAPHLFNLSDIQGLAAKQWGFEPTKTERLIESLY--------LKKYLSYPRTDTRFITEEEFDYLKNYLKS-YQEVINCSFEAVNLEPRENYVNPEKVAKTSHYALIPTENIPNLVTLKPDERLIYEAVVRRTLLMFAADCRYSTTTVEVENQG--LVFKTTGRQMFDPGWAAFSQQKLKGDIELPDYRVGDQIETKVIIVEGM-TKPPKRITESQLISDILPKYGLGTQATRATMLQTIQDRGYITKDKKTGQLFPTNKAYLLIHYLYD--NEFASPETTGGWELFLSQIGEGEINPREFVDAIKEKLAAQIAVVKERSD-------------------------------------------------- |
| 2GAI Chain:A ((7-601)) | --KYIVVESPAKAKTIKSILG------------------NEYEVFASMGHIID--LPKSKFGVDL----EKDFEPEFAVIKGKEKVVEKLKDLAKKGE-LLIASDMDREGEAIAWHIARVT--NTLGRKNRIVFSEITPRVIREAVKNPREI--DMKKVRAQLARRILDRIVGYSLSPVLWRNFKS----------NLSAGRVQSATLKLVCDREREILRFVPKKYHRITVNFDGLTAEIDVKEKKFFDAETLKEIQSIDELV-VEEKKVSVKKFAPPEPFKTSTLQQEAYSKLGFSVSKTMMIAQQLYEGVETKDGHIAFITYMRTDSTRVSDYAKEEARNLITEVFGEEYVGAHEAIR--PTNVFMTPEEAGKY----------------LNSDQKKLYELIWKRFLASQMKPSQYEETRFVLRTKDGKYRFKGTVLKKIFDGYEKVWKTERNT--GEFPFEEGESVKPVVVKIEEQETKPKPRYTEGSLVKE-MERLGIGRPSTYASTIKLLLNRGYIKKIR--GYLYPTIVGSVVMDYLEKKYSDVVSVSFTAEMEKDLDEVEQGKKTDKIVLREFYESFSSVFDRNDRIVVDFPTNQKCSCGKEMRLSFGKYGFYLKCECGKTRSVKNDEIAVIDDGKIFL |
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General information:
TITO was launched using:
| RESULT:
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Template: 2GAI.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -138633 for 4180 contacts (-33.2/contact) +
2D Compatibility (PS) -55107 + (NN) -11381 + (LL) 3644
1D Compatibility (HY) -26400 + (ID) 6300
Total energy: -234177.0 ( -56.02 by residue)
QMean score : 0.394
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