Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
------------MNNSEKVLNLIGLAQRAGRLITGEELVIKAIQNQQVSLIFLANDAGP-NLTKKVTDKSNYYKTEVSTVFSTLELSDALGKPRKVVAVAD------------AGFSKKMRTLMA
1E7K Chain:A ((4-128))
ADVNPKAYPLADAHLTKKLLDLVQQSCNYKQLRKGANEATKTLNRGISEFIVMAADAEPLEIILHLPLLCEDKNVPYVFVRSKQALGRACGVSRPVIACSVTIKEGSQLKQQIQSIQQSIERLLV
General information:
TITO was launched using:
RESULT:
Template:
1E7K.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -49305 for 743 contacts (-66.4/contact) +
2D Compatibility (PS) -10738 + (NN) -6790 + (LL) 0
1D Compatibility (HY) -4800 + (ID) 1000
Total energy: -72633.0 ( -97.76 by residue)
QMean score : 0.662
(partial model without unconserved sides chains):
PDB file :
Tito_1E7K.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1E7K-query.scw
PDB file :
Tito_Scwrl_1E7K.pdb
: