Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MIKLIAIDMDGTLLNDE-KKIPKENIQAIKEATQAGIKIVLCTGRPMSGILPYFNELGLTKEEYIIMNNGCSTYSTKDWQLIDSATLTHDELIFLEEVVKEFPNVCLTLTAENTFYAVGEEVPEIVAYDA-DLVFTKAKSTSLDALRNQEEIVFQAMYMGLDADVTAFQEAVEEALISKFSGVRSQDYIYEIMPQGVTKARGLKSLIAKLGLDINQVMAIGDAPNDIELLDLVPNSVAMGNASDEIKSRCKYITVDNNKAGVAKAIYDYALR |
3R4C Chain:A ((11-266)) | MIKVLLLDVDGTLLSFETHKVSQSSIDALKKVHDSGIKIVIATGRAASDLHEID-AVP---YDGVIALNGAECVLR-DGSVIRKVAIPAQDFRKSMELAREF-DFAVALELNEGVFVNRLTPT-VEQIAGIVEHP-VPPVVDIEEMFERKE-CCQLCFYFDEEAEQKVMPLL----S-GLSATRWHPLFADVNVAGTSKATGLSLFADYYRVKVSEIMACGDGGNDIPMLKAAGIGVAMGNASEKVQSVADFVTDTVDNSGLYKALKHFGVI |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3R4C.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -159380 for 2177 contacts (-73.2/contact) +
2D Compatibility (PS) -27435 + (NN) -10262 + (LL) 996
1D Compatibility (HY) -13600 + (ID) 3050
Total energy: -212731.0 ( -97.72 by residue)
QMean score : 0.548
|
|
|