Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ---MEKIILTATAESIEQVKQLLAIGIDRIYVGEENYGLRLPHSFSDDELREIAKLVHDAGKELTVACNALMHQEMMDNIKPFLELMKEINVDYLVVGDAGVFYINKRDGYNFKLIYDTSVFVTSSRQVNFWGQHGAVETVLAREIPSEELFKMSENLEFPAEILVYGASVIHHSKR---PLLQNYYNFTHITDEKTRERGLFLAEPGDPESHYSIYEDKHGTHIFINNDINMMTKVTELVEHH----------FTHWKLDGIYCPGDNFVAIAEIFVETARLIENGTFTQDQAF------LFDERIRKLHPKGRGLDTGFYDFDPSTVK---- |
| 1GHS Chain:A ((1-306)) | IGVCYGVIGNNLPSRSDVVQLYRSKGINGMRIYFAD--GQALSALRNSGIGLILDIGNDQLANIAAS-TSNAASWVQNNVRPYY---PAVNIKYIAAGNE---VQGGATQSILPAMRNLNAALSAAGLGAIKVSTSIRFDEVANSFPPSAG-------VFK---NAYMTDVARLLASTGAPLLANVYPYFAYRDNPGSISLNYATFQPGTT-----VRDQNNGLTYTSLFDAMVDAVYAALEKAGAPAVKVVVSESGWPSAG--GFAASAGNARTYNQGLINHVGGGTPKKREALETYIFAMFNENQKTGDATERSF--GLFNPDKSPAYNIQF |
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General information:
TITO was launched using:
| RESULT:
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Template: 1GHS.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -48288 for 2256 contacts (-21.4/contact) +
2D Compatibility (PS) -28893 + (NN) -3679 + (LL) 2200
1D Compatibility (HY) -2000 + (ID) 1850
Total energy: -82510.0 ( -36.57 by residue)
QMean score : 0.178
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