Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MITSIVFDVDDTIYDQQAPYRIAVEKCFPDFDMSAINQAYIRFRHYSDIGFPRVMAGEWTTEYFRFWRCKETLLEFGYREIDEATGIYFQEIYEHE-LENITMLDEMRMTLDFLKSKNVPMGIITNGPTEHQLKKVKKLGLYDYVDPKRVIVSQATGFQKPEKEIFNLAAEQFDM-NPSTTLYVGDSYDNDIMGAFNGGWHSMWFNHRGRSLKPGIKPVYDVAIDNFEQLFGAVKVLFDLPDNKFIFDINDKSNPVLEMGLNNGLMMAAERLLESNMSVDKVVILLRLTAKQEKVLRMKYAR |
3SD7 Chain:A ((28-239)) | NYEIVLFDLDGTLTDPKEGITKSIQYSLNSFGIKEDLENL---DQF--IGPPL-------HDTFK-----EYYKFED--KKAKEAVEKYREYFADKGIFENKIYENMKEILEMLYKNGKILLVATSKPTVFAETILRYFDIDRYFK--YIAGSNLDGTRVNKNEVIQYVLDLCNVKDKDKVIMVGDRK-YDIIGAKKIGIDSIGVLYGYGSFEEISESEPTYIVENVESIKDILL------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3SD7.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -107524 for 1748 contacts (-61.5/contact) +
2D Compatibility (PS) -22536 + (NN) -6942 + (LL) 7136
1D Compatibility (HY) -10000 + (ID) 1700
Total energy: -141566.0 ( -80.99 by residue)
QMean score : 0.401
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