Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNKKIAGIGLASIAVLSLAACGHRGASKSGGKSDSLKVAMVTDTGGVDDKSFNQSGWEGMQAWGKKNGLKKGAGFDYFQSASESDYATNLDTAVSSGYKLIF---GIGFSLHDAIDKAADNNKDVNYVIVDDVIKGKDNVASVVFADNESAYLAGIAAAKTT----KTKTVGFVGGMESEVITRFEKGFEAGVKSVDKSIKIKVDYAGSFGDAAKGKTIAAAQYASGADI--VYQVAGGTGAGVFSEAKSRNESLKEADKVWVLGVDRDQAAEGKYTSKDGKASNFVLASSIKEVGKSVELIATKTSKGKFPGGNVTTYGL--KDGGVDIATTNLSDDAVK---AIKEAKAKIISGDIKVPSK |
| 1TJY Chain:A ((1-316)) | --------------------------------GSAERIAFIPKLVG---VGFFTSGGNGAQEAGKALGI--DVTYDGPTEPSVSGQVQLVNNFVNQGYDAIIVSAVSPDGLCPALKRAMQRG--VKILTWDSDTKPECRSYYINQGTPKQLGSMLVEMAAHQVDKEKAKVAFFYSSPTVTDQNQWVKEAKAKISQEHPGWEIVTTQFGYN-DATKSLQTAEGIIKAYPDLDAIIAPDANALPAAAQAAENLK-----RNNLAIVGFS--TPNVMRPYVQRGTVKEFGLWDVVQQGKISVYVANALLKNMPMNVGDSLDIPGIGKVTVSPNSEQGYHYEAKGNGIVLLPERVIFNKDNIDKYDF |
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General information:
TITO was launched using:
| RESULT:
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Template: 1TJY.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -50420 for 2663 contacts (-18.9/contact) +
2D Compatibility (PS) -32775 + (NN) -9044 + (LL) 2064
1D Compatibility (HY) -400 + (ID) 2350
Total energy: -92925.0 ( -34.89 by residue)
QMean score : 0.396
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