Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAQLYYKYGTMNSGKTIEILKVAHNYEEQGKPVVIMTSALDTRDEFGVVSSRIGMRREAVPISDDMDIFSYIQNLPQKPYCVLIDECQFLSKKNVYDLARVVDDLDVPVMAFGLKNDFQNNLFEGSKHLLLLADKIDEIKTICQYCSK-KATMVLRTENGKPVYEGDQIQIGGNETYIPVCRKHYFNPDI
2ORW Chain:A ((2-181))
SGKLTVITGPMYSGKTTELLSFVEIYKLGKKKVAVFKPK-----HSTMIVS----GVEAHVIERPEEMRKY---IEEDTRGVFIDEVQFFNPSLFEVVKDLL-DRGIDVFCAGLDLTHKQNPFETTALLLSLADTVIKKKAVCHRCGEYNATLTLKVAGG-----EEEIDVGGQEKYIAVCRDCYNTLK-
General information:
TITO was launched using:
RESULT:
Template:
2ORW.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -97981 for 1344 contacts (-72.9/contact) +
2D Compatibility (PS) -18580 + (NN) -8751 + (LL) 1200
1D Compatibility (HY) -10400 + (ID) 2600
Total energy: -137112.0 ( -102.02 by residue)
QMean score : 0.388
(partial model without unconserved sides chains):
PDB file :
Tito_2ORW.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2ORW-query.scw
PDB file :
Tito_Scwrl_2ORW.pdb
: