Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MDLFLSLERKFKAASDKEVSKQQEAYLRHHFKCYGIKSPERRMLYKELIKAAKRQAKIDWQLLDKCW-QSDYREYHHFVLDYLLAMSQFLTYNDCSRLEFYARHQQWWDSIDVLTKIFGNLSLKDDKVMNLLSEWSLDQDFWMRRLA-IEHQLGFKEKTNTDILSLFILRNTGSQEFFINKAIGWALRDYSKYNKVWVKDFISNHYDELSTLSIREGSKYL- |
4D0Y Chain:A ((1-184)) | ----AEVVNKGDYYSIQGKYDEIIVANKHYPLSKDYNPGENPTAKAELVKLIKAMQEAGFPISDHYSGFRSYETQTKLYQDYVNQDGKEAADRYSAR-PGYSEHQTGL-AFDVIGTD-GDL-VTEEKAAQWLLDHAADYGFVVRYLKGKEKETGYMAEE-------WHLRYVGKEAKEIAES-GLSLEEYYGF----------------------EGGDYVD |
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General information:
TITO was launched using:
| RESULT:
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Template: 4D0Y.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -29916 for 1410 contacts (-21.2/contact) +
2D Compatibility (PS) -18196 + (NN) 661 + (LL) 2828
1D Compatibility (HY) -400 + (ID) 1900
Total energy: -46923.0 ( -33.28 by residue)
QMean score : 0.196
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