Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MVKVQTGGKLYIAGEYAILYPGQ---VAILKNIPIYMTALATFADNYSLYSDMFNYTASLQPDKQYSLIQETILLMEEWLINFGKNIKPIHLEITGKLERYGLKFGIGSSGSVVVLTIKAMAALYEIEMPSDLLFKLSAYVLLKRGDNGSMGDIACIAYEHLISYSAFDRRAVSKMIETKPLEQVLEAEWGYRITKIQASLEMDFLVGWTMQPSISKEMINIVKSTITQRFLDDTNYQVVQLLSAFKEGDKEAIKRCLEEISLLLFNLHPSIYTDKLQKLKEASKGLDIVTKSSGSGGGDCGIAISFNKNDNQTLIKRWESAGIELLSKETLS----- |
1FWK Chain:A ((1-296)) | -----MKVRVKAPCTSANLGVGFDVFGLCLKEPYDVIEVEAIDDKEIIIEVD----DKNIPTDPDKNVAGIVAKKMIDDF----NIGKGVKITIKKGVK---AGSGLGSSAASSAGTAYAINELFKLNLDKLKLVDYASYGELASSGAKHADNVAPAIFGGFTMVTNYEPL---------------------EVLHIPIDFKLDILIAIPNISINTKEAREILPKAVGLKDLVNNVGKACGMVYALYNKDKSLFGRYMMSDKVIEPVRGKLI--PNYFKIKEEVKDKVYGITISGSG---PSIIAFPKEEFIDEVENILRDYYENTIRTEVGKGVEVV |
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General information:
TITO was launched using:
| RESULT:
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Template: 1FWK.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -159468 for 2576 contacts (-61.9/contact) +
2D Compatibility (PS) -30776 + (NN) -10322 + (LL) 3016
1D Compatibility (HY) -3600 + (ID) 2200
Total energy: -203350.0 ( -78.94 by residue)
QMean score : 0.417
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