Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKKIGIIVLTLLTFFLVSCGQQTKQESTKTTISKMPKIEGFTYYGKIPENPKKVINFTYSYTGYLLKLGVNVSSYS-LDLEKD-SPVFG---KQLKEAKKLTADDTEAIAAQKPDLIMVFDQ--DPNINTLKKIAPTLVIKYGAQNYLDMMPALGKVFGKEKEANQWVSQWKTKTLAAKKDLHHIL-K-PNTTFTIMDFYDKNIYLYGNNFGRGGELIYDSLGYAAPEKVKKDV--FKKGWFTVSQEAIGDYVGDYALVNINKTTK-------KAASSLKESDVWKNLPAVKKGHIIE-SNYDVFYF-SDPLSLEAQLKSFTKAIKENTN |
| 3MWF Chain:A ((16-294)) | ---------------------------------------------EIKGKPKRVVTLYQGATDVAVSLGVKPVGAVESWTQKPKFEYIKNDLKDTKIVGQEPAPNLEEISKLKPDLIVASKVRNEKVYDQLSKIAPTVSTDTV-FKFKDTTKLMGKALGKEKEAEDLLKKYDDKVAAFQKDAKAKYKDAWPLKASVVNFRADHTRIYA-G--GYAGEILNDLGFKRNKDLQKQVDNGKDIIQLTSKESIPLMNADHIFVVKSDPNAKDAALVKKTESEWTSSKEWKNLDAVKNNQVSDDLDEITWNLAGGYKSSLKLIDDLYEKLNIEKQ |
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General information:
TITO was launched using:
| RESULT:
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Template: 3MWF.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -100494 for 2147 contacts (-46.8/contact) +
2D Compatibility (PS) -28212 + (NN) -13657 + (LL) 3588
1D Compatibility (HY) -4800 + (ID) 3100
Total energy: -146675.0 ( -68.32 by residue)
QMean score : 0.620
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