Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTVYNINHGIGWASSGVEYAQAYRGSVLRKLGIDAKFIFTDFFSADNIISLTRNIGFQDKEIIWLYNFFSDIELAPTTFSIEDLQKQYLGKLVRKEDKGRVIKFFYEDENIYLTVYLDNFNKDKVHRVEIVSNNNLIRKDYYSYTRTFSEYYYPKDGVAHLYQRRFYNEDESTAFLEMVENSSSRFIINGRLLPSKVAFFDYFLESMTFTSKDIILLDRGTDTAQSLLRHGKPAKLGTVVHAEHFSENAVTADTILWNNYYDYQFTNANRFDFFITSTDKQTELLEQQFKQFTNH------NPRIITIPVGSIDNLKMPMD--------------------------------NRRPYSILTASRLASEKHVDWLVRAVIRIREILPEVTFDIYGSGGEE--EKIRNIINAANATEYIRLMGHK---NLSNVYQNYELYLTASKSEGFGLTLLEAIGAGLPLIGFDVRYGNQTFIKDGENGY----------LIPRFDMDVEEAIVEAFKEKVLQLFQ-QDQKALREASYAIA-EGFLTNEVEGKWYNLVKELVQDD |
| 3VUE Chain:A ((237-513)) | -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGILEADRVLTVSPYYAEELISGIA-RGCELDNIMRLTGITGIVNGMDVSEWDPSKDKYITAKYDATTAIEAKALNKEALQAEAGLPVDRKIPLIAFIGRLEEQKGPDVMAAAIPELMQ--EDVQIVLLGTGKKKFEKLLKSMEEK--YPGKVRAVVKFNAPLAHLIMAGADVLAVPSRFEPCGLIQLQGMRYGTPCACASTG-GLVDTVIEGKTGFHMGRLSVDCKVVEPSDV-------KKVAATLKRAIKVVGTPAYEEMVRNCMNQDLSWKGPAKNWENVLLGLGV-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3VUE.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -89944 for 1699 contacts (-52.9/contact) +
2D Compatibility (PS) -24499 + (NN) -16402 + (LL) 19812
1D Compatibility (HY) -3600 + (ID) 1750
Total energy: -116383.0 ( -68.50 by residue)
QMean score : 0.481
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