Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MQGRIVKSLAGFYYVES--DGVVYQTRARGNFRKKGQIPYVGDWVEFSSQDQSEGYILSIEERKNSLVRPPIVNIDQAVVIMSAKEPDFNANLLDRFLVLLEYKMIQPIIYISKLDLLDDLV--VIDDIREHYQNIGYVFCYS-------QEELLPLLADKVTVFMGQTGVGKSTLLNKIAPELKLETGEISDSLGRGRHTTRAVSFYNVH-KGKIADTPGFSSLDYE-VDNAEDLNESFPELRRLSHFCKFRSCTHTHEPKCAVKEALTQGQLWQVRYDNYLQFLSEIENRRETYKKVIKRK |
| 2YV5 Chain:A ((7-297)) | KRGLVVDREAQMIGVYLFEDGKTYRGIPRGKVLKKT-KIYAGDYVWGEVVDPNTFAIEEVEERKNLLIRPKVANVDRVIIVETLKMPEFNNYLLDNMLVVYEYFKVEPVIVFNKIDLLNEEEKKELERWISIYRDAGYDVLKVSAKTGEGIDELVDYLEGFICILAGPSGVGKSSILSRLTGE-ELRTQEV---------TTTGVRLIPFGKGSFVGDTPGFSKVEATMFVKPREVRNYFREFLR--YQCKYPDCTHTNEPGCAVKEAVKNGEISCERYKSYLKIIKVYLEEIKELCRED--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2YV5.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -143775 for 2135 contacts (-67.3/contact) +
2D Compatibility (PS) -28803 + (NN) -16392 + (LL) 608
1D Compatibility (HY) -22000 + (ID) 4600
Total energy: -214962.0 ( -100.68 by residue)
QMean score : 0.550
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