Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSKILFFGEPLIRITPKENDYFADSISTKLFYGGSEVNTARALQGFGQDTKLLSALPNNPIGNSFLQFLKAQGIDTHSIQW-VGERVGLYFLEDSFACRKGEVVYDRDHSSLHDFRINQIDFDQLFEGVSLFHFSGITLSLDESIQEITLLLLKEAKKREITISLDLNFRSKLIS-PKNAKILFSQFATFADICFGIEPLMVDS-QDTTFFNRDEATIEDVKERMISLINHFDFQVIFHTKRLQDEWGRNHYQAYIANRKQEFVTSKEITTAVNQRIGSGDAFVAGALYQLLQHS--------------DSKTVIDFAVASASLKCALEGDNMFETV-TAVNKVLNQSKDIIR |
| 3LJS Chain:A ((4-329)) | KKTILCFGEALIDMLAQPLVKKGMPRAFLQCAGGAPANVAVAVARLGGAVQFVGMLGSDMFGDFLFDSFAEAGVVTDGIVRTSTAKTALAFVALDAHG-ERSFSFYRPPAADLLFRVEHFQDA-SFSDALIFHACSNSMT-DADIAEVTFEGMRRAQAAGAIVSFDLNFRPMLWPNGENPASRLWKGLSLADVVKLSSEELDYLANTL-A--------ADANAVIQQLWQG-RAQ-----LLLVTDAAGP---VHWYTRT-AGGEVPT-----------GDAFVGGMLYTFAQQFDDAAALIDFCHDPESIVSTLRFAAAVGALAV----AFTAMPMLSEVLSLIQEQSE--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3LJS.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -109477 for 2440 contacts (-44.9/contact) +
2D Compatibility (PS) -31261 + (NN) -11581 + (LL) 3392
1D Compatibility (HY) -8000 + (ID) 3000
Total energy: -159927.0 ( -65.54 by residue)
QMean score : 0.425
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