Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKLRRPVLEDKEEILAMYKEFQKESSSVDGGFY--EPTMHFEDWLDHNLNMELGVGVPDNFVPYIQFVSFDNDNNAIGFLNLRLRLNDTLLEKGGHIGYSIRPRQRGKGYAKEQLKLGIEQAHLKNINEILVTCHVDNDASKSVILANGGVLEDCLHQTERYWIT
3DR6 Chain:A ((4-145))
MTIRFADKADCAAITEIYNHAVLHT--AAIWNDRTVDTDNRLAWYEARQ-L-----------LGYPVLVSEENGVVTGYASFGDWRSFDGFRYTVEHSVYVHPAHQGKGLGRKLLSRLIDEARRCGKHVMVAGIESQNAASIRLHHSLGFTVTAQMPQVGVKFGR
General information:
TITO was launched using:
RESULT:
Template:
3DR6.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -27924 for 979 contacts (-28.5/contact) +
2D Compatibility (PS) -15386 + (NN) -8682 + (LL) 212
1D Compatibility (HY) 800 + (ID) 950
Total energy: -51930.0 ( -53.04 by residue)
QMean score : 0.315
(partial model without unconserved sides chains):
PDB file :
Tito_3DR6.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3DR6-query.scw
PDB file :
Tito_Scwrl_3DR6.pdb
: