Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MMVLERERFMTESDIKVIKRDGRLVSFDKYKIYTALLKASNKVIKMSPLVEAKLEMIADHVIAEIYNRFKDNIKIYEIQNIVEHKLLEANEYAIAQEYINYRTQRDFERSQATDINFSIGKLINKDQTVVNENANKDSDVFNTQRDLTAGIVGKSIGLKMLPSHVANAHQKGDIHYHDLDYSPYTPMTNCCLIDFKGMLANGFKIGNAEVESPKSIQTATAQISQIIANVASSQ-YGGCTADRIDEFLAPYAQLNYQKHLKDAKEWVIEDKQEDYARAKTQKDIYDAMQSLEYEINTLFT-SNG-Q-------TPFTSLGFG-LGTN--WFEREIQKAILKIRIQGLGSEHRTAIFPKLIFTLKKGLNLEEDSPNYDIKQLALECATK-RMYPDVLSYDKIID------LTGS---FKAPMGCRSFLQGWRDANGQDVTSGRMNLGVVTVNLPRVAMESNG--------------------DMDKFWE----IFNERMSIARDALVYRVERVKEAIPANAPILY--QYGAFGERLGKYDNVDRLFNH--RRATVSLGYIGLYEVASVFYGGD-W-------------------------------------EDNHQAKAFTVDIVRKMKQLCADWSDEYDYHFSVYSTPSESLTDRFCRLDTEKFGIVT--D----ITDKEYYTNSFHYDVRKNPTPFEKLDFEKI-YPETGASGGFIHYCEYPVLQ----QNPKALEAVWDYA-YDRVGYLGTNTPIDKCYQCQFEGDFTPTDRGFTCPNCGNSDPKTVDVVKRTCGYLGNPQARPMVNGRHKEISARVKHMNGSSIKNQGN |
| 1R9D Chain:A ((252-786)) | ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VSGEGAKSFYEACQLFWFIHAIINIESNGHSISPARFDQYMYPYYENDK---------------------NITDKFAQELIDCIWIKLNDINKVRDEISTKHFGGYPMYQNLIVGGQNSEGKDATNKVSYMALEAAVHV------KLPQPSLSVRIWNK---TPDE----FLLRAAELTREGLGLPAYYNDEVIIPALVSRGLTLEDARDYGIIGCVEPQKP-------GK--TEGWHDSAFFNLARIVELTINSGFDKNKQIGPKTQNFEEMKSFDEFMKAYKAQMEYFVKHMCCADNCIDIAHAERAPL--PFLSSMVDNCIG----KGKSL---QDGGAEYNFSGPQGVGVANIGDSLVAVKKIVFDENKITPSELKKTLNNDFKNSEEIQALLKNAPKFGNDIDEVDNLAREGALVYCREVNKYTNPRGGNFQPGLYPSSI--NVYFGSLTGATPDGRKSGQPLADGVSPSRGCDVSG-------PTAACNSVSKLDHFI-ASNGTLFNQKFHPSALKGDNGLMNLSSLIRSYFDQKGFHVQFNVI---DKK-ILLAAQ-------KNPEKYQD------LIVRVAGYSAQF-I-SLDKSIQNDIIARTEHVM--------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1R9D.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -122694 for 3669 contacts (-33.4/contact) +
2D Compatibility (PS) -46887 + (NN) -16417 + (LL) 18468
1D Compatibility (HY) 3600 + (ID) 3000
Total energy: -166930.0 ( -45.50 by residue)
QMean score : 0.300
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