Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSITSVKKSKPFKLGVAGLLVGASLALPLSVSAASYTVKSGDTLSAIAKNHKTTVQELVSLNSISNADVISIGDVLKLDNSKASQAEAKSQPTIENSMNSSSNLSSSDSAAKEEIARRESNGSYTAQNGQYYGRYQLSQSYLNGDLSPENQEKVADNYVVSRYGSWSAALSFWNSNGWY
1E0G Chain:A ((1-48))
-------------------------------DSITYRVRKGDSLSSIAKRHGVNIKDVMRWNSDTAN--LQPGDKLTLFVK--------------------------------------------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
1E0G.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -12190 for 294 contacts (-41.5/contact) +
2D Compatibility (PS) -5396 + (NN) -3861 + (LL) 6564
1D Compatibility (HY) -3200 + (ID) 800
Total energy: -18883.0 ( -64.23 by residue)
QMean score : 0.568
(partial model without unconserved sides chains):
PDB file :
Tito_1E0G.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1E0G-query.scw
PDB file :
Tito_Scwrl_1E0G.pdb
: