Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKVNGIHHVSALTADAQKNLDFYKKVLGLKLVKKSVNQDEPTMYHLFYGDEVANPGTELTFFEIPRIAPFHAGTNSISSIGLRVPGTEALHYWKERFEEQQVTHSG-I----SKRAGRDILAFQDHEGQRLVLTADEEGKGYGLPVKQS-G-IPEEFSFRGLGPVELTVPYAEPTLHVLTNILGFTEISREPVEGQG----TAVILESGEGGAATEIHLIERNDLPRERQGKGSVHHVAFRVRDEEELAGWHRIISREGFSNSGIVE--RYYFKALYFREPNGILFELSTDGPGFMVDENLDELGQTIALPPYLEHRRAEIEAKLKPIQ
1LGT Chain:A ((1-277))-SIRSLGYMGFAVSDVAAWRSFLTQKLGLMEAGTTDNG-------DLFRIDS---RAWRIAVQQ-------GEVDDLAFAGYEVADAAGLAQMADKLKQAGIAVTTGDASLARRRGVTGLITFADPFGLPLEIYYGASEVF-EKPFLPGAAVSGFLTGEQGLGHFVRCVPDSDKALAFYTDVLGFQLSDVIDMKMGPDVTVPAYFLHCN--ERHHTLAIAAF-------PLPKRIHHFMLEVASLDDVGFAFDRVDADGLITSTLGRHTNDHMVSFYASTPSGVEVEYGWSARTVDRSWVVVRHD------------------------


General information:
TITO was launched using:
RESULT:

Template: 1LGT.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1480 -123138 -83.20 -466.43
target 2D structure prediction score : 0.69
Monomeric hydrophicity matching model chain A : 0.64

3D Compatibility (PKB) : -83.20
2D Compatibility (Sec. Struct. Predict.) : 0.69
1D Compatibility (Hydrophobicity) : 0.64
QMean score : 0.501

(partial model without unconserved sides chains):
PDB file : Tito_1LGT.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1LGT-query.scw
PDB file : Tito_Scwrl_1LGT.pdb: