Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)


Input alignment information:
Query sequenceMNEQETIQEKAILVGCQLPHITDEHFENSMEELASLTKTADGKVLTSVTQKRNRADAATYIGKGKVEELKALVEELEADLLIFNDELSPSQLKSLATAIEVKMIDRTQLILDIFAKRARTREGKLQIELAQLQYALPRLTGQGINLSRQGGGIGARGPGETKLETDRRHIRNRIHEINTQLSTVIRHRSRYRERRKKNGVLQIALVGYTNAGKSTWFNRLTSA-DSYEEDLLFATLDPMTRKMVLPSGYSVLLSDTVGFIQDLPTTLIAA--FRSTLEEVKEADLILHLIDSSNEDYAGHEKTVLRLLEELEADDIPMLTAYNKRDQKLPDFIP-------------TAGR-DHIMVSAKFEDDAAAFKEAIQRYLRQELLTSFEAHVPASEGKLLSRIKSETMVDRFYFNEENEQYDISGYVQEEQSIIGELKKYM
1MKY Chain:A ((178-353))-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TDAIKVAIVGRPNVGKSTLFNAILNKERALVSPIP------VDDEVFID-GRKYVFVDTAGL---------EKYSNYRVVDSIEKADVVVIVLDATQGITRQDQRM-AGLMER---RGRASVVVFNKWDLVVHREKRYDEFTKLFREKLYFIDYSPLIFTSADKGWNIDRMIDAMNLAY-------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 1MKY.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output 		Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 724 -84709 -117.00 -596.54
target 2D structure prediction score : 0.75
Monomeric hydrophicity matching model chain A : 0.60

3D Compatibility (PKB) : -117.00
2D Compatibility (Sec. Struct. Predict.) : 0.75
1D Compatibility (Hydrophobicity) : 0.60
QMean score : 0.462

(partial model without unconserved sides chains):
PDB file : Tito_1MKY.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1MKY-query.scw
PDB file : Tito_Scwrl_1MKY.pdb: