Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)


Input alignment information:
Query sequenceMDTYSVFTTKWKQLTGVDLTLYKEAQMKRRLTSLYEKKGFQSFKDFAAALEKDQALLNETLDRMTINVSEFYRNYKRWEVLETAILPLIKTSRPLKIWSAACSTGEEPYTLAMLLDQQKGLPGYQILATDIDEKALEKAKKGVYQERSLQEVPLSVKDRYFTQNANRSYEVKTEIKKNITFKKHNLLADRY--EQDFDLIVCRNVFIYFTESAKEELYLKMAHSLKKNGVLFVGSTEQIFNPEKFGLVPADTFFYQKR
4KDR Chain:A ((62-169))--------------------------------------------------------------------------------------------FGKKVLDVGCGGGIL----AESMAREG----ATVTGLDMGFEPLQVAKLHALES-----------------------------GIQVDYVQETVEEHAAKHAGQYDVVTCMEMLEHVPDP--QSVVRACAQLVKPGGDVFFSTLNRN-------------------


General information:
TITO was launched using:
RESULT:

Template: 4KDR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output 		Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 519 -26126 -50.34 -246.47
target 2D structure prediction score : 0.60
Monomeric hydrophicity matching model chain A : 0.59

3D Compatibility (PKB) : -50.34
2D Compatibility (Sec. Struct. Predict.) : 0.60
1D Compatibility (Hydrophobicity) : 0.59
QMean score : 0.551

(partial model without unconserved sides chains):
PDB file : Tito_4KDR.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4KDR-query.scw
PDB file : Tito_Scwrl_4KDR.pdb: