Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MTTTRTERNFAGIGDVRIVYDVWTPDTAPQAVVVLAHGLGEHARRYDHVAQRLGAAGLVTYALDHRGHGRSGGKRVLVRDISEYTADFDTLVGIATREYPGCKRIVLGHSMGGGIVFAYGVERPD-NYDLMVLSAPAVAAQDLVS----PVV-AVAAKLLGVVVPGL-PV-QELDFTAI-S-RDP------EVVQAYNTDPLVHHGRVPAGIGRALLQV-GETMPRRAPALTAPLLVLHGTDDRLIPIEGSRRLVECVGSADVQLKEYPGLYHEVFNE-PERNQVLDDVVAWLTERL |
1ZOI Chain:A ((3-276)) | --------YVTTKDGVQIFYKDWGP--RDAPVIHFHHGWPLSADDWDAQLLFFLAHGYRVVAHDRRGHGRSSQVW-DGHDMDHYADDVAAVVAHLG----IQGAVHVGHSTGGGEVVRYMARHPEDKVAKAVLIAAVPPLMVQTPGNPGGLPKSVFDGFQAQVASNRAQFYRDVPAGPFYGYNRPGVEASEGIIGNWWRQGMIG---SAKAHYDGIVAFSQTDFTEDLKGIQQPVLVMHGDDDQIVPYENSGVLSAKLL-PNGALKTYKGYPHGMPTTHAD--VINADLLAFIRS-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1ZOI.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -164527 for 2275 contacts (-72.3/contact) +
2D Compatibility (PS) -27362 + (NN) -8817 + (LL) 1284
1D Compatibility (HY) -11600 + (ID) 2850
Total energy: -213872.0 ( -94.01 by residue)
QMean score : 0.431
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