Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -MTHGMVLGKFMPPHAGHVY-LCEFARRWVDELTIVVGSTAAEPIPGAQ------------RVAW-MRELFPFDRVVHLANENPQRPWEHPDFWDIWKASLQGVLATR----PDFVFGAEPYNADFAQVLGARFVAVDHGRTVVPVTATDIRADPLGHWQHIPRCVRPAFVKRVSIIGPESTGKTTLAQAVAEKLRTKWVPER-AKMLRELNGGSLIGLEWAEI---VRGQIASEEALARDADRVLICDTDPLATTVWAEFLAGGCPQELRD-LARRPYDLTLLTTPDVPWDADDGRCVPGARGTFFARCEQALRAAGRSFVVITGG-WEERLSVSLRAVEELVRARR------ |
| 1LW7 Chain:A ((1-355)) | EKKVGVIFGKFYPVHTGHINMIYEAFSK-VDELHVIVCSDTVRDLKLFYDSKMKRMPTVQDRLRWMQQIFKYQKNQIFIHHLVEDGIPSYPNGWQSWSEAVKTLFHEKHFEPSIVFSSEPQDKAPYEKYLGLEVSLVDPDRTFFNVSATKIRTTPFQYWKFIPKEARPFFAKTVAILGGESSGKSVLVNKLAAVFNTTSAWEYGREFVFEKLGGDEQAMQYSDYPQMALGHQRYIDYAVRHSHKIAFIDTDFITTQAFCIQYEGKAHPFLDSMIKEYPFDVTILLKNNTEQKQ---------RQQFQQLLKKLLDKYKVPYIEIESPSYLDRYNQVKAVIEKVLNEEEISELQN |
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General information:
TITO was launched using:
| RESULT:
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Template: 1LW7.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -156974 for 2338 contacts (-67.1/contact) +
2D Compatibility (PS) -34893 + (NN) -23475 + (LL) 12
1D Compatibility (HY) -15600 + (ID) 3600
Total energy: -234530.0 ( -100.31 by residue)
QMean score : 0.391
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