Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIHYRTIDSPIGPLTLAGHGSVLTNLRMLEQTYEP---SRT-----HWTPDPGAFSGAVDQLNAYFAGELTEFDVELDLRGTDFQQRVWKALLTIPYGETRSYGEIADQIGAPGAARAVGLANGHNPIAIIVPCHRVIGASGKLTGYGGGINRKRALLELEKSRAPADLTLFD
1SFE Chain:A ((14-176))
-VRYALADCELGRCLVAESERGICAILLGDDDATLISELQQMFPAADNAPADLMFQQHVREVIASLNQRDTPLTLPLDIRGTAFQQQVWQALRTIPCGETVSYQQLANAIGKPKAVRAVASACAANKLAIVIPCHRVVRGDGSLSGYRWGVSRKAQLLRREAEN---------
General information:
TITO was launched using:
RESULT:
Template:
1SFE.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -87029 for 1158 contacts (-75.2/contact) +
2D Compatibility (PS) -16462 + (NN) -5111 + (LL) 740
1D Compatibility (HY) -11200 + (ID) 2800
Total energy: -121862.0 ( -105.23 by residue)
QMean score : 0.538
(partial model without unconserved sides chains):
PDB file :
Tito_1SFE.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1SFE-query.scw
PDB file :
Tito_Scwrl_1SFE.pdb
: