Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ----------MGHLPPPAEVRHPVYATRVLCEVANERGVPTADVLA---GTAIEPADLDDPDAVV----------GAL----DEITAVRRLLARLPDDAGIGIDVGSR------------FALTHFGLFGFAVMSCGTL-RELLTIAMRYFALTTMHVDITLFETADDCLVELDASHLPADVRGFFIERDIAGIIATT------TSFALPLAAK----YADQVSAELAVDAEL-------LRPLLELVPVHD-----VAFGRAHNR----VHF--------------PRAMFD-EPLPQADRHTLEMCIAQCDVLMQRNERRRGITALVRSKLFRDSGLFPTFTDVAGELDMHPRTLRRRLAEEGTSFRALLGEARSTVAVDLLRNVGLTVQQVSTRLGYTEVSTFSHAFKRWYGVAPSEYSRRG--- |
| 4NOM Chain:A ((26-432)) | EDGGKHWVVIVAGSNGWYNYRHQADACHAY-QIIHRNGIPDEQIIVMMYDDIANSEENPTPGVVINRPNGTDVYKGVLKDYTGEDVTPENFLAVLRGDAEAVKGKGSGKVLKSGPRDHVFIYFTDHGATGILVFPNDDLHVKDLNKTIRYMYEHKMYQKMVFYIEA--CESGSMMNHLPDDI----------NVYATTAANPKESSYACYYDEERGTYLGDWYSVNWMEDSDVEDLTKETLHKQYHLVKSHTNTSHVMQYGNKSISTMKVMQFQGMKHRASSPISLPPVTHLDLTPSPDVPLTILKRKLLRTNDVKESQNLIGQIQQFLDARHVIEKSVHKIVSLLAGFGETAERHLSER--------TMLTAHDCYQEAVTHFRTHCFNWHSVTYEHALRYLYVLANLCEAPYPIDRIEMAMDKVCL |
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General information:
TITO was launched using:
| RESULT:
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Template: 4NOM.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -133118 for 2523 contacts (-52.8/contact) +
2D Compatibility (PS) -34290 + (NN) -8900 + (LL) 1288
1D Compatibility (HY) -12000 + (ID) 3200
Total energy: -190220.0 ( -75.39 by residue)
QMean score : 0.129
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