Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ------------MALPQSALSELLDAFRTGDGVDLIRDAVRLVLQELSELEATE---RIGAARYERSDTRVTDRNGARSRVLSTQAGDVELRIPKLRK-GSFFPA------------ILEPRRRIDQALYAVVME--AYVHGISTRAVDDLVEAMGVETGISKSEVSRICAGLDEIVGAFRTRTLGHIEFPYVYLDATYLNVR--------------------NGTGQVVSMAVIVASGIAADGSREILGLDV-GDSEDE------------------------TFWRGFLTSLK-GRGLGGV--RLVISDQHAGLVKALKRCFQGAGHQ--RC---------------RVHFARNLLAHVPKDKAD--MVASMFRMIFSAPDAEAVHATWEGVRDRLAASFPKIGPLMDDARAEVLAFTAFPKAHWQKIWST-------NPLERINKEIKRRSR-VVGI-----FPNPAAVIRLVGAVLADMHDEWQASERRYLSEASMALLYPDSDNAVVAAISGGQ------------ |
| 4K0V Chain:A ((23-536)) | AMDLILINSLPLVSDAETSLTCIASGWRPHEPITIGRDFEALMNQHQDPLEVTQDVTREWAKKVVWKREKASKINGAYFCEGRVRGEAIRIRTMKMRQQASFLPATLTMTVDKGDNVNISFKKVLIKEEDAVIYKNGSFIHSVPRHEVPDILEV-------------HLPHAQPQDAGVYSARYIGGNLFTSAF---TRLIVRRCEAQKWGPECNHLCTACMNNGVCHEDTGECICPPGFMGRTCEKACELHTFGRTCKERCSGQEGCKSYVFCLPDPYGCSCATGWKGLQCNEACHPGFYGPDCKLRCSCNNGEMCDRFQGCLCSPGWQGLQCEREGIPRMTPKIVDLPDHIEVNSGKFNPICKASGWPLPTNEEMTLVKPDGTVLHPKDFNHTDHFSVAIFTIHRILPPD-SGVWVCSVNTVAGMVEKPFNISVKVLPKPLNAPNVIDTGHNFAVINISSEPYFGDGPIKSKKLLYKPVNHYEAWQHIQVTNEIVTLNYLEPRTEYELCVQLVRRGEGGEGHPGPVRRF |
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General information:
TITO was launched using:
| RESULT:
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Template: 4K0V.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -48300 for 2561 contacts (-18.9/contact) +
2D Compatibility (PS) -39519 + (NN) 14915 + (LL) 1036
1D Compatibility (HY) -6800 + (ID) 3850
Total energy: -82518.0 ( -32.22 by residue)
QMean score : 0.060
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