Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMAVSQPAISKTLKELEEILGARLFERSKAGAELTEAGVTFLRYAGPCVQALRDGVNTLRGHEAQVETVRVGVLSTVESLVVPEVIRRLHRRHGALVVSVATGPSAYLLAQLKVGELDLVVGRMTDSPDIQGLTFEHLYSESMMLVVRPGHPLLAAPLGDLQRLAEFPLVLPLAGTTIRRHADSLFVQWGIAL----AGQRLETLSPTLSRSYVLRSEAIWVAPRDAVRLDVGNGELAELDLGIREPGGSVGLCHNAALPLPLGAQWFSAVLREVAAELH
3JV9 Chain:A ((3-210))----------------------------------------------------------------EGAFKLGLIFTVAPYLLPKLIVSLRRTAPKMPLMLEENYTHTLTESLKRGDVDAIIVAEPF--QEPGIVTEPLYDEPFFVIVPKGHSFEELDAVSPRMLGEEQVLLLTEGNCMRDQVLSSCSELAAKQRIQGLTNTLQGSSINTIRHMVASGLAISVLPATALTEN-DHMLFSIIPFEGTPPSRRVVLAYRRNFVRPKALSAMKAAIMQSQLHGV


General information:
TITO was launched using:
RESULT:

Template: 3JV9.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -139927 for 1574 contacts (-88.9/contact) +
2D Compatibility (PS) -21745 + (NN) -7473 + (LL) 5004
1D Compatibility (HY) -7600 + (ID) 2000
Total energy: -173741.0 ( -110.38 by residue)
QMean score : 0.378

(partial model without unconserved sides chains):
PDB file : Tito_3JV9.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3JV9-query.scw
PDB file : Tito_Scwrl_3JV9.pdb: