Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKPFSLAGLFGFALLLSGCGDEPPPAPPRPVLTVTVKTLKNDDLGRFAGSIQARYESVLGFRTNGRIASRLFDVGDFVGKGALLATLDPTDQQNQLRASQGDLASAEAQLIDAQANARRQEELFARSVTAQARLDDARTRLKTSQASFDQAKAAVQQARDQLSYTRLVTDFDGVITTWHAEAGQVVSAGQA--VVTLARPEVREAVFDLPTEVAESLPADAR-------------FLVSAQLDPQARTTGSIRELGPQADASTRTRRVRLSLAQTPEAFRLGSTIQVQLSSAGSVRSVLPASVLLERDGKTQVWVVDGKQSSVALREVQVLSRDERQVVIGQGLADGDRVVRAGVNSLKPGQKIKLDEDAR |
| 1T5E Chain:A ((29-259)) | --------------------------------------------TELPGRTNAFRIAEVRPQVNGIILKRLFKEGSDVKAGQQLYQIDP-------ATYEADYQSAQANLASTQEQAQRYKLLVADQAVS-------KQQYADANAAYLQSKAAVEQARINLRYTKVLSPISGRIGRSAVTEGALVTNGQANAMATVQQLDPIYVDVTQPSTALLRLRRELASGQLERAGDNAAKVSLKLEDGSQYPLEGRLEFSEVSVDEGTGSVTIRAVFPNPNNELLPGMFVHAQL---------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1T5E.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -66769 for 1494 contacts (-44.7/contact) +
2D Compatibility (PS) -23509 + (NN) -7748 + (LL) 7872
1D Compatibility (HY) -5200 + (ID) 2700
Total energy: -98054.0 ( -65.63 by residue)
QMean score : 0.485
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