Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNRSALDFRHFVDHLRRQGDLVDVHTEVDANLEIGAI--------TRRVYERRAPAPLFHNIRDSLPGARVLGAPAGLRADRARAHSRLALHFGLPE------HSGPRDIVAMLRAAMRA-EPIAPRRLERGPVQENVWLGEQVDLTRFPVPLLHEQDGGRYFGTYGFHVVQTPDGSWDSWSVGRLMLVDRN--TLAGPTIPTQHIGIIREQWRRLGKPT-PWAMALGAPPAALAAAGMPLPEGVSEAGYVGALVGEPVEVVRTQTNGLWVPANTEIVLEGEISLDETALEGPMGEYHGYSFPIGKPQPLFHVHALSFRDQPILPICVAGTPPEENHTIWGTMISAQLLDVAQNAGLPVDMVWCSYEAATCWAVLSIDVQRLAALGTDAAAFAARV-----AETVFGSHAGHLVPKLILVGNDIDVTEIDQVVWALATRAHPLHDHFAFPQIRDFPMVPYLDAEDKARGSGGRLVINCLYPEQFAGQMRAATASFRHAYPTALRRRVEERWSDYGFGDA |
| 1DFO Chain:A ((2-417)) | --------LKREMNIADYDAELWQAMEQEKVRQEEHIELIASENYTSPRVMQAQGSQLTNKYAEGYPGKRYYGGCEYVDIVEQLAIDRAKELFGAD-YANVQPHSGSQANFAVYTALLEPGDTVLGMNLAHGGHLTH---GSP-----V-------NFSGKLYNIVPYGI-D-ATGHIDYADLEKQAKEHKPKMIIGGFSAYSGVVD--WAKMREIADSIGAYLFVDMAHVAGLVAAG-VYPNPVPHAHVVTTTTHK---TLAGPRGGLILAK------------G--GSEELYKKLNSAVFPGGQGGPLMHVIAGKAVALKE-----AMEPEFKTYQQQVAKNAKAMVEVFLERGYKVVS------GGTDNHLFLVDLVDKNLTGKEADAALGRANITVNKNSVPNDPKSPFVTSGIRVG-----------TPAITRRGF---KEAEAKELAGW-MCDVLDSIN------------------------------DEAVIERIKGKVLDICARYPVY-A |
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General information:
TITO was launched using:
| RESULT:
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Template: 1DFO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -87285 for 3297 contacts (-26.5/contact) +
2D Compatibility (PS) -41541 + (NN) -8194 + (LL) 7836
1D Compatibility (HY) -10000 + (ID) 3550
Total energy: -142734.0 ( -43.29 by residue)
QMean score : 0.301
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