Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSLPAAPKVPPQVAEQAVRWLVELQGGADDERLRQAWQRWRQAAPEHEQAWRHIE-AVNQRLAGIGTPLALAAINAPHSPQRRRALKTLLLVLAAGGSAWGLRESGSLQRWSADYATGVGERRRLALADGSRLELNSDTAVDVRFDAGERRLLLLRGEIQLSTGHDPRPLHVYSAEGR--LRPVGTRFDVRQFAGRTRVAVHEG-AVQVENRAGQGLLL---------PSGRQLDF--DRERLGAPQPLP--VGSGAWTDG-----MLVAAGMRLDEFLAEVARYRPGRLGCDPRIGGLRISG--SYPLDDSERILATLPAVLPV--EVRRVTRYWVGVHPRE |
| 2GOP Chain:A ((10-347)) | TFAKFAYLSDPRTKGELVAYVLTKANLKDNKYENTIVIENLK-----NNARRFIENATMPRISPDGKKIAFMRANEEKK------VSEIWVADLETLSSKKILEAKNIRSLEWNEDS----RKLLIVGFKRREVPAWEKTTFWIFDTESEEVIEEFEKPRFSSGIWHRDKIVVNVPHREIIPQYFKFWDIYIWEDGKEEKMFEKVSFYAVDSDGERILLYGKPEKKYMSEHNKLYIYDGKEVMGILDEVDRGVGQAKIKDGKVYFTLFEEGSVNLYIWDGEIKPIAKGR----HWIMGFDVDEIVVYLKETATR----LRELFTWDGEEKQLTDYNDPIFAKL |
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General information:
TITO was launched using:
| RESULT:
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Template: 2GOP.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -36813 for 2150 contacts (-17.1/contact) +
2D Compatibility (PS) -30225 + (NN) 975 + (LL) 1232
1D Compatibility (HY) -11600 + (ID) 2450
Total energy: -78881.0 ( -36.69 by residue)
QMean score : 0.084
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