Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLMLSRILLCLAALASSTSALADTVWMKNGDRLTGKITLFDGGKLLLKTDYGGDITLKWDKISTFESEQNLLVKQDAETGEHSKGIKAAGPGQVTLVNGEPKTVELASIQQMMPPKPILQDWVWNGNVDFSLDRKQAENDVSDYDIDFKTNARHGLWRHNVQGEYNREKKNGQVSTDNYSGQYALDRFIDDHWFWQGQVAYKRDMIEDLAKKRTVGTGPGYQFWDNELGAFSIATLVNRNDYEFADGEKEHFYSSSFKWDYNRYLLAKQFELFTNGEVSKPLQSGLDYELQTEAGIRYKLTSWASLSMKAEWDKFSGNDGNVNQRRYTFGLGVGW |
| 2Y90 Chain:A ((20-69)) | --------------------VPVSIYLVNGIKLQGQIESFDQFVILLKN--TVSQMVYKHAISTVVPSRPVS----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2Y90.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -16449 for 274 contacts (-60.0/contact) +
2D Compatibility (PS) -5250 + (NN) -902 + (LL) 16088
1D Compatibility (HY) -4000 + (ID) 650
Total energy: -11163.0 ( -40.74 by residue)
QMean score : 0.475
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