Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MQTIKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAGQEDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHCPKTPFLLVGTQIDLRDDPSTIEKLAKNKQKPITPETAEKLARDLKAVKYVECSALTQKGLKNVFDEAILAALEPPEPKKSRRCVLL
3QBV Chain:C ((1-178))
MQTIKCVVVGDGAVGKTCLLISYTTNKFP-EYVPTVFDNYAVTVMIGGEPYTLGLRDTAGQEDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHCPKTPFLLVGTQIDLRDDPSTIEKLAKNKQKPITPETAEKLARDLKAVKYVECSALTQKGLKNVFDEAILAALE-------------
General information:
TITO was launched using:
RESULT:
Template:
3QBV.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -138019 for 1418 contacts (-97.3/contact) +
2D Compatibility (PS) -19063 + (NN) -8201 + (LL) 556
1D Compatibility (HY) -25600 + (ID) 8800
Total energy: -199127.0 ( -140.43 by residue)
QMean score : 0.724
(partial model without unconserved sides chains):
PDB file :
Tito_3QBV.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3QBV-query.scw
PDB file :
Tito_Scwrl_3QBV.pdb
: