Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTEYKLVVVGAGGVGKSALTIQLIQNHFVDEYDPTIEDSYRKQVVIDGETCLLDILDTAGQEEYSAMRDQYMRTGEGFLCVFAINNTKSFEDIHQYREQIKRVKDSDDVPMVLVGNKCDLAARTVESRQAQDLARSYGIPYIETSAKTRQGVEDAFYTLVREIRQHKLRKLNPPDESGPGCMSCKCVLS
3L8Y Chain:A ((1-166))
MTEYKLVVVGAGGVGKSALTIQLIQNHFVDEYDPTIEDSYRKQVVIDGETCLLDILDTAGQEEYSAMRDQYMRTGEGFLCVFAINNTKSFEDIHQYREQIKRVKDSDDVPMVLVGNKCDLAARTVESRQAQDLARSYGIPYIETSAKTRQGVEDAFYTLVREIRQH-----------------------
General information:
TITO was launched using:
RESULT:
Template:
3L8Y.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -102217 for 1406 contacts (-72.7/contact) +
2D Compatibility (PS) -18251 + (NN) -5062 + (LL) 488
1D Compatibility (HY) -23200 + (ID) 8300
Total energy: -156542.0 ( -111.34 by residue)
QMean score : 0.620
(partial model without unconserved sides chains):
PDB file :
Tito_3L8Y.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3L8Y-query.scw
PDB file :
Tito_Scwrl_3L8Y.pdb
: