Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MLGITVLAALLACASSCGVPSFPPNLSARVVGGEDARPHSWPWQISLQYLKNDTWRHTCGGTLIASNFVLTAAHCISN---TRTYRVAVGKNNLEVEDEEGSLFVGVDTIHVHKRWNALLLRNDIALIKLAEHVELSDTIQVACLPEKDSLLPKDYPCYVTGWGRLWTNGPIADKLQQGLQPVVDHATCSRIDWWGFRVKKTMVCAGG-DGVISACNGDSGGPLNCQLENGSWEVFGIVSFGSRRGCNTRKKPVVYTRVSAYIDWINEKMQL |
2OQ5 Chain:A ((1-232)) | -----------------------------IVGGTEVEEGEWPWQASLQWDG----SHRCGATLINATWLVSAAHCFTTYKNPARWTASFGVTIK-----PSKMKRGLRRIIVHEKYKHPSHDYDISLAELSSPVPYTNAVHRVCLPDASYEFQPGDVMFVTGFGALKNDGYSQNHLRQAQVTLIDATTCNEPQAYNDAITPRMLCAGSLEGKTDACQGDSGGPLVSSDARDIWYLAGIVSWGD--ECAKPNKPGVYTRVTALRDWITSKTGI |
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General information:
TITO was launched using:
| RESULT:
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Template: 2OQ5.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -183064 for 1938 contacts (-94.5/contact) +
2D Compatibility (PS) -24372 + (NN) -666 + (LL) 2516
1D Compatibility (HY) -12800 + (ID) 3850
Total energy: -222236.0 ( -114.67 by residue)
QMean score : 0.464
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