Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MGVQVETISPGDGRTFPKRGQTCVVHYTGMLEDGKKFDSSRDRNKPFKFVLGKQEVIRGWEEGVAQMSVGQRAKLTISPDYAYGATGHPGIIPPNATLIFDVELLKLE
4C02 Chain:B ((1-108))
MGVEIETISPGDGRTFPKKGQTCVVHYTGMLQNGKKFDSSRDRNKPFKFRIGKQEVIKGFEEGAAQMSLGQRAKLTCTPDVAYGATGHPGVIPPNATLIFDVELLNLE
General information:
TITO was launched using:
RESULT:
Template:
4C02.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -53468 for 809 contacts (-66.1/contact) +
2D Compatibility (PS) -12081 + (NN) -7038 + (LL) 0
1D Compatibility (HY) -12400 + (ID) 4600
Total energy: -89587.0 ( -110.74 by residue)
QMean score : 0.746
(partial model without unconserved sides chains):
PDB file :
Tito_4C02.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4C02-query.scw
PDB file :
Tito_Scwrl_4C02.pdb
: