Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MGVEIETISPGDGRTFPKKGQTCVVHYTGMLQNGKKFDSSRDRNKPFKFRIGKQEVIKGFEEGAAQMSLGQRAKLTCTPDVAYGATGHPGVIPPNATLIFDVELLNLE
1BL4 Chain:B ((1-107))
-GVQVETISPGDGRTFPKRGQTCVVHYTGMLEDGKKVDSSRDRNKPFKFMLGKQEVIRGWEEGVAQMSVGQRAKLTISPDYAYGATGHPGIIPPHATLVFDVELLKLE
General information:
TITO was launched using:
RESULT:
Template:
1BL4.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -53396 for 781 contacts (-68.4/contact) +
2D Compatibility (PS) -11922 + (NN) -5161 + (LL) 208
1D Compatibility (HY) -12800 + (ID) 4400
Total energy: -87471.0 ( -112.00 by residue)
QMean score : 0.653
(partial model without unconserved sides chains):
PDB file :
Tito_1BL4.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1BL4-query.scw
PDB file :
Tito_Scwrl_1BL4.pdb
: