Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSDAVSSDRNFPNSTNLPRNPSMADYEARIFTFGTWIYSVNKEQLARAGFYALGEGDKVKCFHCGGGLTDWKPSEDPWEQHAKWYPGCKYLLEQKGQEYINNIHLTHSLEECLVRTT
4EC4 Chain:J ((6-113))
------SDRNFPNSTNLPRNPSMADYEARIFTFGTWIYSVNKEQLARAGFYALGEGDKVKCFHCGGGLTDWKPSEDPWEQHAKWYPGCKYLLEQKGQEYINNIHLTHSLEECLV---
General information:
TITO was launched using:
RESULT:
Template:
4EC4.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -25306 for 755 contacts (-33.5/contact) +
2D Compatibility (PS) -12004 + (NN) -8105 + (LL) 616
1D Compatibility (HY) -14400 + (ID) 5400
Total energy: -64599.0 ( -85.56 by residue)
QMean score : 0.456
(partial model without unconserved sides chains):
PDB file :
Tito_4EC4.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4EC4-query.scw
PDB file :
Tito_Scwrl_4EC4.pdb
: