Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMASREDELRNCVVCGDQATGYHFNALTCEGCKGFFRRTVSKSIGPTCPFAGSCEVSKTQRRHCPACRLQKCLDAGMRKDMILSAEALALRRAKQAQRRAQQTPVQLSKEQEELIRTLLGAHTRHMGTMFEQFVQFRPPAHLFIHHQ------PLPTLAPVLPLVTHFADINTFMVLQVIKFTKDLPVFRSLPIEDQISLLKGAAVEICHIVLNTTFCLQTQNFLCGPLRYTIEDGARVSPTVGFQVEFLELLFHFHGTLRKLQLQEPEYVLLAAMALFSPDRPGVTQRDEIDQLQEEMALTLQSYIKGQQRRPRDRFLYAKLLGLLAELRSINEAYGYQIQHIQGLSAMM-PLLQEICS-
1SKX Chain:A ((25-313))---------------------------------------------------------------------------------------------------------LTEEQRMMIRELMDAQMKTFDTTFSHFKNFRLPGVKVSLQLRGEDGSVWNYKPPIFSLLPHMADMSTYMFKGIISFAKVISYFRDLPIEDQISLLKGAAFELCQLRFNTVFNAETGTWECGRLSYCLE-------------LLLEPMLKFHYMLKKLQLHEEEYVLMQAISLFSPDRPGVLQHRVVDQLQEQFAITLKSYIECNRPQPAHRFLFLKIMAMLTELRSINAQHTQRLLRIQDIHPFATPLMQELFGI


General information:
TITO was launched using:
RESULT:

Template: 1SKX.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -185488 for 1750 contacts (-106.0/contact) +
2D Compatibility (PS) -24907 + (NN) -14965 + (LL) 7680
1D Compatibility (HY) -27200 + (ID) 5200
Total energy: -250080.0 ( -142.90 by residue)
QMean score : 0.538

(partial model without unconserved sides chains):
PDB file : Tito_1SKX.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1SKX-query.scw
PDB file : Tito_Scwrl_1SKX.pdb: