Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MQFSGEKISGQRDLQKSKMRFTFTSRCLALFLLLNHPTPILPAFSNQTYPTIEPKPFLYVVGRKKMMDAQYKCYDRMQQLPAYQGEGPYCNRTWDGWLCWDDTPAGVLSYQFCPDYFPDFDPSEKVTKYCDEKGVWFKHPENNRTWSNYTMCNAFTPEKLKNAYVLYYLAIVGHSLSIFTLVISLGIFVFFRKLTTIFPLNWKYRKALSLGCQRVTLHKNMFLTYILNSMIIIIHLVEVVPNGELVRRDPVSCKILHFFHQYMMACNYFWMLCEGIYLHTLIVVAVFTE---KQRLRWYYLLGWGFPLVPTTIHAITRAVY--FN--DNCWLSVE-------T--HL----LYIIHGPVMAALVVNFFFLLNIVRVLVTKMRET--HEAESHMYLKAVKATMILVPLLGIQFVVFPWR----PS-N-KMLGKIYDYVMHSLIHFQGFFVATIYCFCNNEVQTTVKRQWAQFKIQWNQRWGRRPSNRSARAAAAAAEAGDIPIYICHQEPRNEPANNQGEESAEIIPLNIIEQESSA |
| 1U19 Chain:A ((45-325)) | -----------------------------------------------------------------------------------------------------------------------------------------------------------------------AYMFLLIMLGFPINFLTLYVTVQHK----------------KLRTPLNYILLNLAVADLFMVFGGFTTTLYTS-LHGYFVFGPTGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFRFGENHAIMGVAFTWVMALACAAPPLVGWSRYIPEGMQCSCGIDYYTPHEETNNESFVIYMFVVHFIIPLIVIFFCYGQLVF----TVKEAAAQQQESATTQKAEKEVTRMVIIMVIAFLICWLPYAGVAFYIFTHQGSDFGPIFMTIPAFFAKTSAVYNPVIYIMMNKQFRNCMVTTLCCGKNPLGDDEASTTVSKTETSQVAPA----------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1U19.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -230718 for 1920 contacts (-120.2/contact) +
2D Compatibility (PS) -24816 + (NN) 4896 + (LL) 13684
1D Compatibility (HY) -6800 + (ID) 800
Total energy: -244554.0 ( -127.37 by residue)
QMean score : ?
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