Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -MDTGPDQSYFSGNHWFVFSVYLLTFLVGLPLNLLALVVFVGKLQRRPVAVDVLLLNLTASDLLLLLFLPFRMVEAANGMHWPLPFILCPLSGFIFFTTIYLTALFLAAVSIERFLSVAHPLWYKTRPRLGQAGLVSVACWLLASAHCSVVYVIEFSGDISHSQGTNGTCYLEFRKDQLAILLPVRLEMAVVLFVVPLIITSYCYSRLVWILGRGGSHRRQRRVAGLLAATLLNFLVCFGPYNVSHVVGYICGESPAWRIYVTLLSTLNSCVDPFVYYFSSSGFQADFHELLRRLCGLWGQ----WQQESSMELKEQKGGEEQRADRPAERKTSEHSQGCGTGGQVACAES------------- |
| 4XNV Chain:A ((38-382)) | SFKCALTKTGF--QFYYLPAVYILVFIIGFLGNSVAIWMFVFHMKPWS-GISVYMFNLALADFLYVLTLPALIFYYFNKTDWIFGDAMCKLQRFIFHVNLYGSILFLTCISAHRYSGVVYPK-SLGRLKKKNAICISVLVWLIVVVAISP--ILFYSGTGVRKNKT-ITCYDTTSDEYLRSYFIYSMCTTVAMFCVPLVLILGCYGLIVRALI----YKMKKYTC-----TVCGYIYNPEDGDPDN------GVNPGTDFKDIVCPLCGVGKDQFEEV--EEPLRRKSIYLVIIVLTVFAVSYIPFHVMKTMNLRARLDFQTPAMCAFNDRVYATYQVTRGLASLNSCVNPILYFLAGDTFRRR |
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General information:
TITO was launched using:
| RESULT:
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Template: 4XNV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -197683 for 2313 contacts (-85.5/contact) +
2D Compatibility (PS) -33351 + (NN) -12498 + (LL) 1216
1D Compatibility (HY) -24800 + (ID) 3350
Total energy: -270466.0 ( -116.93 by residue)
QMean score : 0.216
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