Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | ---MPQILIFTYLNMFYFFPPLQILAENLTMV--TEFLLLGFSSLGEIQLALFVVFLFLYLVILSGNVTIISVIHLDKSLHTPMYFFLGILSTSETFYTFVILPKMLINLLSVARTISFNCCALQMFFFLGFAITNCLLLGVMGYDRYAAICHPLHYPTLMSWQVCGKLAAACAIGGFLASLTVVNLVFSLPFCSANKVNHYFCDISAVILLACTNTDVNEFVIFICGVLVLVVPFLFICVSYLCILRTILKIPSAEGRRKAFSTCASHLSVVIVHYGCASFIYLRPTANYVSNKDRLVTVTYTIVTPLLNPMVYSLRNKDVQLAIRKVLGKKGSLKLYN |
4TRQ Chain:B ((1-286)) | GKQRILLYLVNKLNNIYFRIESPQLCSNIFKNFQPKSMLAHFNEYQLDQQIEYRYLLGRYYLL-----------------------------NSQVHNAFVQFNEAFQSLLNL--PLTNQAITRNGTRILNYMIPTGLILGKM--VKWGPLRPFLSQETIDNWSVLYKHVRY-------GNIQGVSLWLRQNERHLCARQLLIVLLEKLPMVTYRNLIKTVIKSWTTEWGQNKLPYSLIERVLQLSIGPTFEDPGA----QEITIYNGIHSPKNVENVLVTLINLGLLRANCFPQLQLCVVKKT---TMIQEIVPPVNERITKMF------PAHSHVLW- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4TRQ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -311067 for 2155 contacts (-144.3/contact) +
2D Compatibility (PS) -28561 + (NN) -7384 + (LL) 3744
1D Compatibility (HY) -9200 + (ID) 2200
Total energy: -354668.0 ( -164.58 by residue)
QMean score : 0.208
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