Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MTSRSVCEKMTMTTENPNQ--TVVSHFFLEGLRYTAKHSSLFFLLFLLI-----------YSITVAGNLLILLTVGSDSHLSLP-----------------------------MYHFLGHLSFLDACLSTV--TVPKVMAGLLTLDGKVISFEGCAVQLY------CFHFLASTECFLYTVM--AYDRYLAICQPLHYPVAMN-RRMCAEMAGITWAIGATHAAIHTS----------LTFRLLYCGPCHIAYFFCD------------IPPVLKLACTDTTINELVMLASIGIVAAGCLILIVISYIFIVAAVLRIRTAQGRQRAFSPCTAQLTGVLLYYV-----PPVCIYLQPRSSEAGAGAPAVFYTIVTPMLNPFIYTLRNKEVKH-------------------------------ALQRLLCSSFRESTAGSPPP |
2B1X Chain:A ((1-441)) | MLSNELRQTLQKGLHDVNSDWTVPAAIINDPEVHDVERERIFGHAWVFLAHESEIPERGDYVVRYISEDQFIVCRDEGGEIRGHLNACRHRGMQVCRAEMGNTSHFRCPYHGWTYSNTGSLVGVPAGKDAYGNQLKKSDWNLRPMP-NLASYKGLIFGSLDPHADSLEDYLGDLKFYLDIVLDRSDAGLQVVGAPQRWVIDANWKLGADNFVGDAYHTMMTHRSMVELGLAPPDPQFALYGEHIHTGHGHGLGIIGPPPGMPLPEFMGLPENIVEELERRLTPEQVEIFRPTAFIHGTVFPNLSIGNFLMGKDHLSAPTAFLTLRLWHPLGPDKMEVMSFFLVEKDAPDWFKDESYKSYLRTFGISGGFEQDDAENWRSITRVMGGQFAKTGELNYQMGRGVLEPDPNWTGPGEAYPLDYAEANQRNFLEYWMQLMLAESPL |
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General information:
TITO was launched using:
| RESULT:
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Template: 2B1X.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -303444 for 2549 contacts (-119.0/contact) +
2D Compatibility (PS) -34044 + (NN) 6634 + (LL) -172
1D Compatibility (HY) -4000 + (ID) 2150
Total energy: -337176.0 ( -132.28 by residue)
QMean score : 0.026
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